{
  "_id": "6a1f2290b401979e734208e4",
  "Type": "Package",
  "Package": "reclanc",
  "Title": "A Revival of the ClaNC Algorithm",
  "Version": "0.0.0.9000",
  "Authors@R": "c(person(given = \"Kai\",\nfamily = \"Aragaki\",\nrole = c(\"aut\", \"cre\"),\nemail = \"kaiaragaki@proton.me\",\ncomment = c(ORCID = \"0000-0002-9458-0426\")),\nperson(given = \"Alan\",\nfamily = \"Dabney\",\nrole = c(\"aut\", \"cph\"),\nemail = \"adabney@stat.tamu.edu\",\ncomment = \"Original creator of ClaNC\"))",
  "Description": "Classification of microarrays to nearest centroids (ClaNC)\n<doi:10.1093/bioinformatics/bti756> selects optimal genes for\ncentroids, similar to Prediction Analysis for Microarrays (PAM)\nbut using fewer corrective factors, resulting in greater\nsensitivity and accuracy. Unfortunately, the original source of\nClaNC can no longer be found. 'reclanc' reimplements this\nalgorithm, with the the additional benefit of increased\ninteroperability with standard data structures and modeling\necosystems.",
  "License": "MIT + file LICENSE",
  "URL": "https://github.com/KaiAragaki/reclanc,\nhttps://kaiaragaki.github.io/reclanc/",
  "BugReports": "https://github.com/KaiAragaki/reclanc/issues",
  "Encoding": "UTF-8",
  "Language": "en",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "Remotes": [
    "McConkeyLab/cellebrate"
  ],
  "Config/testthat/edition": "3",
  "LazyData": "true",
  "VignetteBuilder": "knitr",
  "Config/pak/sysreqs": "libicu-dev",
  "Repository": "https://kaiaragaki.r-universe.dev",
  "Date/Publication": "2024-07-22 18:32:20 UTC",
  "RemoteUrl": "https://github.com/KaiAragaki/reclanc",
  "RemoteRef": "HEAD",
  "RemoteSha": "4285683e6cddfc50dd12927cd5ae564bd00ae9bb",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-16 07:16:03 UTC",
    "User": "root"
  },
  "Author": "Kai Aragaki [aut, cre] (ORCID: <https://orcid.org/0000-0002-9458-0426>),\nAlan Dabney [aut, cph] (Original creator of ClaNC)",
  "Maintainer": "Kai Aragaki <kaiaragaki@proton.me>",
  "MD5sum": "713f380110cd745222ebb8e5c41e23ff",
  "_user": "kaiaragaki",
  "_type": "src",
  "_file": "reclanc_0.0.0.9000.tar.gz",
  "_fileid": "c87e132413b364a2e4fe0af9eb9f90834e65e9cf7b78118482aea58a42a2322b",
  "_filesize": 130101,
  "_sha256": "c87e132413b364a2e4fe0af9eb9f90834e65e9cf7b78118482aea58a42a2322b",
  "_created": "2026-05-16T07:16:03.000Z",
  "_published": "2026-06-02T18:36:00.158Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79144511919,
      "time": 253,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7031530630"
    },
    {
      "job": 79144511999,
      "time": 237,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7031529092"
    },
    {
      "job": 79144512113,
      "time": 176,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7031522816"
    },
    {
      "job": 79144511961,
      "time": 182,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7031523281"
    },
    {
      "job": 79144510940,
      "time": 533,
      "config": "source",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7031504630"
    },
    {
      "job": 79144510829,
      "time": 205,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7366622268"
    },
    {
      "job": 79144511967,
      "time": 204,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7031525950"
    },
    {
      "job": 79144511910,
      "time": 200,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7031525508"
    },
    {
      "job": 79144511726,
      "time": 207,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7031526053"
    }
  ],
  "_buildurl": "https://github.com/r-universe/kaiaragaki/actions/runs/25955752140",
  "_status": "failure",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/KaiAragaki/reclanc",
  "_commit": {
    "id": "4285683e6cddfc50dd12927cd5ae564bd00ae9bb",
    "author": "Kai Aragaki <kaiaragaki@proton.me>",
    "committer": "Kai Aragaki <kaiaragaki@proton.me>",
    "message": "hush checks\n",
    "time": 1721673140
  },
  "_maintainer": {
    "name": "Kai Aragaki",
    "email": "kaiaragaki@proton.me",
    "login": "kaiaragaki",
    "uuid": 7370516,
    "orcid": "0000-0002-9458-0426"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "cli",
      "role": "Imports"
    },
    {
      "package": "collapse",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "hardhat",
      "role": "Imports"
    },
    {
      "package": "parsnip",
      "role": "Imports"
    },
    {
      "package": "rlang",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "aws.s3",
      "role": "Suggests"
    },
    {
      "package": "Biobase",
      "role": "Suggests"
    },
    {
      "package": "cellebrate",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "recipes",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "S4Vectors",
      "role": "Suggests"
    },
    {
      "package": "SummarizedExperiment",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "tidymodels",
      "role": "Suggests"
    }
  ],
  "_owner": "kaiaragaki",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "kaiaragaki",
      "count": 50,
      "uuid": 7370516
    }
  ],
  "_userbio": {
    "uuid": 7370516,
    "type": "user",
    "name": "Kai Aragaki",
    "description": "whatever the exact opposite of an emotional support dog is"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/reclanc"
  },
  "_devurl": "https://github.com/kaiaragaki/reclanc",
  "_pkgdown": "https://kaiaragaki.github.io/reclanc/",
  "_searchresults": 7,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "extra/reclanc.html",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "clanc"
  ],
  "_datasets": [
    {
      "name": "synthetic_expression",
      "title": "Synthetic Expression of Two Distinct Classes",
      "object": "synthetic_expression",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "clanc",
      "title": "Calculate centroids from expression data with ClaNC",
      "topics": [
        "clanc",
        "clanc.data.frame",
        "clanc.default",
        "clanc.ExpressionSet",
        "clanc.formula",
        "clanc.matrix",
        "clanc.recipe",
        "clanc.SummarizedExperiment"
      ]
    },
    {
      "page": "predict.clanc",
      "title": "Predict from a 'clanc'",
      "topics": [
        "predict.clanc"
      ]
    },
    {
      "page": "synthetic_expression",
      "title": "Synthetic Expression of Two Distinct Classes",
      "topics": [
        "synthetic_expression"
      ]
    }
  ],
  "_readme": "https://github.com/KaiAragaki/reclanc/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "codetools",
    "collapse",
    "cpp11",
    "dplyr",
    "farver",
    "generics",
    "ggplot2",
    "globals",
    "glue",
    "gtable",
    "hardhat",
    "isoband",
    "labeling",
    "lifecycle",
    "magrittr",
    "parsnip",
    "pillar",
    "pkgconfig",
    "prettyunits",
    "purrr",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "rlang",
    "S7",
    "scales",
    "sparsevctrs",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_score": 1.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "reclanc",
  "_universes": [
    "kaiaragaki"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.0.0.9000",
      "date": "2026-05-16T07:19:46.000Z",
      "distro": "noble",
      "commit": "4285683e6cddfc50dd12927cd5ae564bd00ae9bb",
      "fileid": "5c7516d2e5d0b8c86805335264a0cb87d1893201dbdd76571547d159f7441f07",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/kaiaragaki/actions/runs/25955752140"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.0.0.9000",
      "date": "2026-05-16T07:19:38.000Z",
      "distro": "noble",
      "commit": "4285683e6cddfc50dd12927cd5ae564bd00ae9bb",
      "fileid": "eaf97e865b0006a5dbbafe4d2deb02a90a8e40077ef6769e12a09a5f04c84b1c",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/kaiaragaki/actions/runs/25955752140"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.0.0.9000",
      "date": "2026-05-16T07:18:42.000Z",
      "commit": "4285683e6cddfc50dd12927cd5ae564bd00ae9bb",
      "fileid": "6c228bde7d0b21de7b05918c82f9cc9325e731e9c8b95f95ff36303ae4fa6106",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/kaiaragaki/actions/runs/25955752140"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.0.0.9000",
      "date": "2026-05-16T07:18:31.000Z",
      "commit": "4285683e6cddfc50dd12927cd5ae564bd00ae9bb",
      "fileid": "e8e29a99def63f1ee1968b773ed8e71ce8781b0b378317748359d15461245f28",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/kaiaragaki/actions/runs/25955752140"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-05-16T07:18:55.000Z",
      "commit": "4285683e6cddfc50dd12927cd5ae564bd00ae9bb",
      "fileid": "0f988c52a3886a21f23c5aae709023c657b618c2c7950c8e4f926cf7b6b9c06c",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/kaiaragaki/actions/runs/25955752140"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-05-16T07:18:55.000Z",
      "commit": "4285683e6cddfc50dd12927cd5ae564bd00ae9bb",
      "fileid": "55c8979e4d9d98a6cb71a387276049ccbc371c46f4985846a1087921ba27ffe5",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/kaiaragaki/actions/runs/25955752140"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.0.0.9000",
      "date": "2026-05-16T07:18:55.000Z",
      "commit": "4285683e6cddfc50dd12927cd5ae564bd00ae9bb",
      "fileid": "8729371931e1b366b4b7f5f6a0b5d9f60d49d1ea814657e77f3db7f0bae31b91",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/kaiaragaki/actions/runs/25955752140"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.0.0.9000",
      "date": "2026-06-02T18:35:43.000Z",
      "commit": "4285683e6cddfc50dd12927cd5ae564bd00ae9bb",
      "fileid": "607305aa4f9e4a1f0b64e0ab156db1bed0aba5fbcc160940b430de604abfc864",
      "status": "success",
      "buildurl": "https://github.com/r-universe/kaiaragaki/actions/runs/25955752140"
    }
  ]
}