Package: ezmtt 0.2.0
ezmtt: Easy MTT Assay Tidying and Plotting
This package automates the analysis and plotting of standard MTT workflows.
Authors:
ezmtt_0.2.0.tar.gz
ezmtt_0.2.0.zip(r-4.5)ezmtt_0.2.0.zip(r-4.4)ezmtt_0.2.0.zip(r-4.3)
ezmtt_0.2.0.tgz(r-4.4-any)ezmtt_0.2.0.tgz(r-4.3-any)
ezmtt_0.2.0.tar.gz(r-4.5-noble)ezmtt_0.2.0.tar.gz(r-4.4-noble)
ezmtt_0.2.0.tgz(r-4.4-emscripten)ezmtt_0.2.0.tgz(r-4.3-emscripten)
ezmtt.pdf |ezmtt.html✨
ezmtt/json (API)
| # Install 'ezmtt' in R: |
| install.packages('ezmtt', repos = c('https://kaiaragaki.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/kaiaragaki/ezmtt/issues
- mtt - Example data from an MTT
Last updated 17 days agofrom:b8bcd3eaa4. Checks:OK: 1 WARNING: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 04 2024 |
| R-4.5-win | WARNING | Nov 04 2024 |
| R-4.5-linux | WARNING | Nov 04 2024 |
| R-4.4-win | WARNING | Nov 04 2024 |
| R-4.4-mac | WARNING | Nov 04 2024 |
| R-4.3-win | WARNING | Nov 04 2024 |
| R-4.3-mac | WARNING | Nov 04 2024 |
Exports:geom_mttGeomMttmtt_calcmtt_fitmtt_plotmtt_tidystat_ic_mtt
Dependencies:abindbackportsbootbroomcarcarDataclicodetoolscolorspacecowplotcpp11DerivdoBydplyrdrcfansifarverFormulagenericsggplot2ggrepelgluegplategtablegtoolsisobandlabelinglatticelifecyclelme4magrittrMASSMatrixMatrixModelsmgcvmicrobenchmarkminqamodelrmultcompmunsellmvtnormnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigplotrixpurrrquantregR6RColorBrewerRcppRcppEigenrlangsandwichscalesSparseMstringistringrsurvivalTH.datatibbletidyrtidyselectutf8vctrsviridisLitewithrzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Plot MTT data | GeomMtt geom_mtt |
| Example data from an MTT | mtt |
| Calculate normalized ODs without fitting | mtt_calc |
| Fit an curve through MTT data | mtt_fit mtt_fit.data.frame mtt_fit.default mtt_fit.gp mtt_fit.spectramax |
| Plot MTT fits | mtt_plot |
| Tidy mtt data | mtt_tidy |
| Plot MTT data | stat_ic_mtt |
